Trans-eQTLs across different cancer types
In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
Gene symbol
|
Gene position (hg19)
|
p-valule
|
|||
|---|---|---|---|---|---|---|---|---|---|
| THCA | rs7829396 | chr8:10999583 | C/T | SGK223 | chr8:8175258-8244008:- | 0.4 | 7.22 | 2.08E-12 | Box Plot |
| THCA | rs7829788 | chr8:3301736 | C/T | CSMD1 | chr8:2792875-4852494:- | -0.36 | -5.97 | 4.68E-9 | Box Plot |
| THCA | rs7830734 | chr8:11795639 | C/T | SGK223 | chr8:8175258-8244008:- | -0.45 | -8.43 | 4.09E-16 | Box Plot |
| THCA | rs7831039 | chr8:11427637 | A/T | SGK223 | chr8:8175258-8244008:- | 0.41 | 7.79 | 4.33E-14 | Box Plot |
| THCA | rs7831346 | chr8:11193530 | C/T | SGK223 | chr8:8175258-8244008:- | -0.35 | -6.71 | 5.59E-11 | Box Plot |
| THCA | rs7831557 | chr8:10280228 | C/T | SGK223 | chr8:8175258-8244008:- | 0.38 | 6.91 | 1.52E-11 | Box Plot |
| THCA | rs7832316 | chr8:3240672 | A/C | CSMD1 | chr8:2792875-4852494:- | -0.32 | -6.19 | 1.27E-9 | Box Plot |
| THCA | rs7832708 | chr8:10190040 | C/T | SGK223 | chr8:8175258-8244008:- | -0.4 | -7.71 | 7.34E-14 | Box Plot |
| THCA | rs7833079 | chr8:11792129 | A/G | SGK223 | chr8:8175258-8244008:- | -0.47 | -8.72 | 4.61E-17 | Box Plot |
| THCA | rs7833435 | chr8:10801137 | A/G | SGK223 | chr8:8175258-8244008:- | 0.36 | 6.92 | 1.5E-11 | Box Plot |
| THCA | rs7833685 | chr8:11792535 | A/G | SGK223 | chr8:8175258-8244008:- | -0.46 | -8.54 | 1.75E-16 | Box Plot |
| THCA | rs7833741 | chr8:10896425 | A/C | SGK223 | chr8:8175258-8244008:- | 0.35 | 5.94 | 5.63E-9 | Box Plot |
| THCA | rs7833781 | chr8:10333477 | A/G | SGK223 | chr8:8175258-8244008:- | -0.4 | -7.4 | 6.0E-13 | Box Plot |
| THCA | rs7833832 | chr8:10865112 | G/A | SGK223 | chr8:8175258-8244008:- | 0.39 | 7.06 | 5.79E-12 | Box Plot |
| THCA | rs7833937 | chr8:9324768 | C/G | SGK223 | chr8:8175258-8244008:- | -0.35 | -5.91 | 6.6E-9 | Box Plot |